data validation

Library for exploring and validating machine learning data

765
174
Python

TensorFlow Data Validation

Python
PyPI
Documentation

TensorFlow Data Validation (TFDV) is a library for exploring and validating
machine learning data. It is designed to be highly scalable
and to work well with TensorFlow and TensorFlow Extended (TFX).

TF Data Validation includes:

  • Scalable calculation of summary statistics of training and test data.
  • Integration with a viewer for data distributions and statistics, as well
    as faceted comparison of pairs of features (Facets)
  • Automated data-schema
    generation to describe expectations about data
    like required values, ranges, and vocabularies
  • A schema viewer to help you inspect the schema.
  • Anomaly detection to identify anomalies,
    such as missing features,
    out-of-range values, or wrong feature types, to name a few.
  • An anomalies viewer so that you can see what features have anomalies and
    learn more in order to correct them.

For instructions on using TFDV, see the get started guide
and try out the example notebook.
Some of the techniques implemented in TFDV are described in a
technical paper published in SysML’19.

Installing from PyPI

The recommended way to install TFDV is using the
PyPI package:

pip install tensorflow-data-validation

Nightly Packages

TFDV also hosts nightly packages on Google Cloud. To install the latest nightly
package, please use the following command:

export TFX_DEPENDENCY_SELECTOR=NIGHTLY
pip install --extra-index-url https://pypi-nightly.tensorflow.org/simple tensorflow-data-validation

This will install the nightly packages for the major dependencies of TFDV such
as TFX Basic Shared Libraries (TFX-BSL) and TensorFlow Metadata (TFMD).

Sometimes TFDV uses those dependencies’ most recent changes, which are not yet
released. Because of this, it is safer to use nightly versions of those
dependent libraries when using nightly TFDV. Export the
TFX_DEPENDENCY_SELECTOR environment variable to do so.

NOTE: These nightly packages are unstable and breakages are likely to happen.
The fix could often take a week or more depending on the complexity involved.

Build with Docker

This is the recommended way to build TFDV under Linux, and is continuously
tested at Google.

1. Install Docker

Please first install docker and docker-compose by following the directions:
docker;
docker-compose.

2. Clone the TFDV repository

git clone https://github.com/tensorflow/data-validation
cd data-validation

Note that these instructions will install the latest master branch of TensorFlow
Data Validation. If you want to install a specific branch (such as a release
branch), pass -b <branchname> to the git clone command.

3. Build the pip package

Then, run the following at the project root:

sudo docker-compose build manylinux2010
sudo docker-compose run -e PYTHON_VERSION=${PYTHON_VERSION} manylinux2010

where PYTHON_VERSION is one of {39, 310, 311}.

A wheel will be produced under dist/.

4. Install the pip package

pip install dist/*.whl

Build from source

1. Prerequisites

To compile and use TFDV, you need to set up some prerequisites.

Install NumPy

If NumPy is not installed on your system, install it now by following these
directions
.

Install Bazel

If Bazel is not installed on your system, install it now by following these
directions
.

2. Clone the TFDV repository

git clone https://github.com/tensorflow/data-validation
cd data-validation

Note that these instructions will install the latest master branch of TensorFlow
Data Validation. If you want to install a specific branch (such as a release
branch), pass -b <branchname> to the git clone command.

3. Build the pip package

TFDV wheel is Python version dependent – to build the pip package that
works for a specific Python version, use that Python binary to run:

python setup.py bdist_wheel

You can find the generated .whl file in the dist subdirectory.

4. Install the pip package

pip install dist/*.whl

Supported platforms

TFDV is tested on the following 64-bit operating systems:

  • macOS 12.5 (Monterey) or later.
  • Ubuntu 20.04 or later.

Notable Dependencies

TensorFlow is required.

Apache Beam is required; it’s the way that efficient
distributed computation is supported. By default, Apache Beam runs in local
mode but can also run in distributed mode using
Google Cloud Dataflow and other Apache
Beam
runners.

Apache Arrow is also required. TFDV uses Arrow to
represent data internally in order to make use of vectorized numpy functions.

Compatible versions

The following table shows the package versions that are
compatible with each other. This is determined by our testing framework, but
other untested combinations may also work.

tensorflow-data-validation apache-beam[gcp] pyarrow tensorflow tensorflow-metadata tensorflow-transform tfx-bsl
GitHub master 2.59.0 10.0.1 nightly (2.x) 1.16.1 n/a 1.16.1
1.16.1 2.59.0 10.0.1 2.16 1.16.1 n/a 1.16.1
1.16.0 2.59.0 10.0.1 2.16 1.16.0 n/a 1.16.0
1.15.1 2.47.0 10.0.0 2.15 1.15.0 n/a 1.15.1
1.15.0 2.47.0 10.0.0 2.15 1.15.0 n/a 1.15.0
1.14.0 2.47.0 10.0.0 2.13 1.14.0 n/a 1.14.0
1.13.0 2.40.0 6.0.0 2.12 1.13.1 n/a 1.13.0
1.12.0 2.40.0 6.0.0 2.11 1.12.0 n/a 1.12.0
1.11.0 2.40.0 6.0.0 1.15 / 2.10 1.11.0 n/a 1.11.0
1.10.0 2.40.0 6.0.0 1.15 / 2.9 1.10.0 n/a 1.10.1
1.9.0 2.38.0 5.0.0 1.15 / 2.9 1.9.0 n/a 1.9.0
1.8.0 2.38.0 5.0.0 1.15 / 2.8 1.8.0 n/a 1.8.0
1.7.0 2.36.0 5.0.0 1.15 / 2.8 1.7.0 n/a 1.7.0
1.6.0 2.35.0 5.0.0 1.15 / 2.7 1.6.0 n/a 1.6.0
1.5.0 2.34.0 5.0.0 1.15 / 2.7 1.5.0 n/a 1.5.0
1.4.0 2.32.0 4.0.1 1.15 / 2.6 1.4.0 n/a 1.4.0
1.3.0 2.32.0 2.0.0 1.15 / 2.6 1.2.0 n/a 1.3.0
1.2.0 2.31.0 2.0.0 1.15 / 2.5 1.2.0 n/a 1.2.0
1.1.1 2.29.0 2.0.0 1.15 / 2.5 1.1.0 n/a 1.1.1
1.1.0 2.29.0 2.0.0 1.15 / 2.5 1.1.0 n/a 1.1.0
1.0.0 2.29.0 2.0.0 1.15 / 2.5 1.0.0 n/a 1.0.0
0.30.0 2.28.0 2.0.0 1.15 / 2.4 0.30.0 n/a 0.30.0
0.29.0 2.28.0 2.0.0 1.15 / 2.4 0.29.0 n/a 0.29.0
0.28.0 2.28.0 2.0.0 1.15 / 2.4 0.28.0 n/a 0.28.1
0.27.0 2.27.0 2.0.0 1.15 / 2.4 0.27.0 n/a 0.27.0
0.26.1 2.28.0 0.17.0 1.15 / 2.3 0.26.0 0.26.0 0.26.0
0.26.0 2.25.0 0.17.0 1.15 / 2.3 0.26.0 0.26.0 0.26.0
0.25.0 2.25.0 0.17.0 1.15 / 2.3 0.25.0 0.25.0 0.25.0
0.24.1 2.24.0 0.17.0 1.15 / 2.3 0.24.0 0.24.1 0.24.1
0.24.0 2.23.0 0.17.0 1.15 / 2.3 0.24.0 0.24.0 0.24.0
0.23.1 2.24.0 0.17.0 1.15 / 2.3 0.23.0 0.23.0 0.23.0
0.23.0 2.23.0 0.17.0 1.15 / 2.3 0.23.0 0.23.0 0.23.0
0.22.2 2.20.0 0.16.0 1.15 / 2.2 0.22.0 0.22.0 0.22.1
0.22.1 2.20.0 0.16.0 1.15 / 2.2 0.22.0 0.22.0 0.22.1
0.22.0 2.20.0 0.16.0 1.15 / 2.2 0.22.0 0.22.0 0.22.0
0.21.5 2.17.0 0.15.0 1.15 / 2.1 0.21.0 0.21.1 0.21.3
0.21.4 2.17.0 0.15.0 1.15 / 2.1 0.21.0 0.21.1 0.21.3
0.21.2 2.17.0 0.15.0 1.15 / 2.1 0.21.0 0.21.0 0.21.0
0.21.1 2.17.0 0.15.0 1.15 / 2.1 0.21.0 0.21.0 0.21.0
0.21.0 2.17.0 0.15.0 1.15 / 2.1 0.21.0 0.21.0 0.21.0
0.15.0 2.16.0 0.14.0 1.15 / 2.0 0.15.0 0.15.0 0.15.0
0.14.1 2.14.0 0.14.0 1.14 0.14.0 0.14.0 n/a
0.14.0 2.14.0 0.14.0 1.14 0.14.0 0.14.0 n/a
0.13.1 2.11.0 n/a 1.13 0.12.1 0.13.0 n/a
0.13.0 2.11.0 n/a 1.13 0.12.1 0.13.0 n/a
0.12.0 2.10.0 n/a 1.12 0.12.1 0.12.0 n/a
0.11.0 2.8.0 n/a 1.11 0.9.0 0.11.0 n/a
0.9.0 2.6.0 n/a 1.9 n/a n/a n/a

Questions

Please direct any questions about working with TF Data Validation to
Stack Overflow using the
tensorflow-data-validation
tag.

Links