yas3fs

YAS3FS (Yet Another S3-backed File System) is a Filesystem in Userspace (FUSE) interface to Amazon S3. It was inspired by s3fs but rewritten from scratch to implement a distributed cache synchronized by Amazon SNS notifications. A web console is provided to easily monitor the nodes of a cluster.

danilop
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Python

Yet Another S3-backed File System: yas3fs

Join the chat at https://gitter.im/danilop/yas3fs

YAS3FS (Yet Another S3-backed File System) is a Filesystem in Userspace (FUSE)
interface to Amazon S3.
It was inspired by s3fs but rewritten from scratch to implement
a distributed cache synchronized by Amazon SNS notifications.
A web console is provided to easily monitor the nodes of a cluster through the YAS3FS Console project.

If you use YAS3FS please share your experience on the wiki, thanks!

  • It allows to mount an S3 bucket (or a part of it, if you specify a path) as a local folder.
  • It works on Linux and Mac OS X.
  • For maximum speed all data read from S3 is cached locally on the node, in memory or on disk, depending of the file size.
  • Parallel multi-part downloads are used if there are reads in the middle of the file (e.g. for streaming).
  • Parallel multi-part uploads are used for files larger than a specified size.
  • With buffering enabled (the default) files can be accessed during the download from S3 (e.g. for streaming).
  • It can be used on more than one node to create a “shared” file system (i.e. a yas3fs “cluster”).
  • SNS notifications are used to update other nodes in the cluster that something has changed on S3 and they need to invalidate their cache.
  • Notifications can be listened using HTTP or SQS endpoints.
  • If the cache grows to its maximum size, the less recently accessed files are removed.
  • Signed URLs are provided through Extended file attributes (xattr).
  • AWS credentials can be passed using AWS_ACCESS_KEY_ID and AWS_SECRET_ACCESS_KEY environment variables.
  • In an EC2 instance a IAM role can be used to give access to S3/SNS/SQS resources.
  • It is written in Python (2.6) using boto and fusepy.

This is a personal project. No relation whatsoever exists between this project and my employer.

License

Copyright © 2012-2014 Danilo Poccia, http://danilop.net

This code is licensed under the The MIT License (MIT). Please see the LICENSE file that accompanies this project for the terms of use.

Introduction

This is the logical architecture of yas3fs:

yas3fs Logical Architecture

I strongly suggest to start yas3fs for the first time with the -df (debug + foreground) options, to see if there is any error.
When everything works it can be interrupted (with ^C) and restarted to run in background
(it’s the default with no -f options).

To mount an S3 bucket without using SNS (i.e. for a single node):

yas3fs s3://bucket/path /path/to/mount

To persist file system metadata such as attr/xattr yas3fs is using S3 User Metadata.
To mount an S3 bucket without actually writing metadata in it,
e.g. because it is a bucket you mainly use as a repository and not as a file system,
you can use the --no-metadata option.

To mount an S3 bucket using SNS and listening to an SQS endpoint:

yas3fs s3://bucket/path /path/to/mount --topic TOPIC-ARN --new-queue

To mount an S3 bucket using SNS and listening to an HTTP endpoint (on EC2):

yas3fs s3://bucket/path /path/to/mount --topic TOPIC-ARN --ec2-hostname --port N

On EC2 the security group must allow inbound traffic from SNS on the selected port.

On EC2 the command line doesn’t need any information on the actual server and can easily be used
within an Auto Scaling group.

Quick Installation

WARNING: PIP installation is no longer supported. Use “git clone” instead.

Requires Python 2.6 or higher.
Install using pip.

pip install yas3fs

If it fails, check the CentOS 6 installation steps below.

If you want to do a quick test here’s the installation procedure depending on the OS flavor (Linux or Mac):

  • Create an S3 bucket in the AWS region you prefer.
  • You don’t need to create anything in the bucket as the initial path (if any) is created by the tool on the first mount.
  • If you want to use an existing S3 bucket you can use the --no-metadata option to not use user metadata to persist file system attr/xattr.
  • If you want to have more than one node in sync, create an SNS topic in the same region as the S3 bucket and write down the full topic ARN (you need it to run the tool if more than one client is connected to the same bucket/path).
  • Create a IAM Role that gives access to the S3 and SNS/SQS resources you need or pass the AWS credentials to the tool using environment variables (see -h).

On Amazon Linux

sudo yum -y install fuse fuse-libs
sudo easy_install pip
sudo pip install yas3fs # assume root installation
sudo sed -i'' 's/^# *user_allow_other/user_allow_other/' /etc/fuse.conf # uncomment user_allow_other
yas3fs -h # See the usage
mkdir LOCAL-PATH
# For single host mount
yas3fs s3://BUCKET/PATH LOCAL-PATH
# For multiple hosts mount
yas3fs s3://BUCKET/PATH LOCAL-PATH --topic TOPIC-ARN --new-queue

On Ubuntu Linux

sudo apt-get update
sudo apt-get -y install fuse python-pip 
sudo pip install yas3fs # assume root installation
sudo sed -i'' 's/^# *user_allow_other/user_allow_other/' /etc/fuse.conf # uncomment user_allow_other
sudo chmod a+r /etc/fuse.conf # make it readable by anybody, it is not the default on Ubuntu
yas3fs -h # See the usage
mkdir LOCAL-PATH
# For single host mount
yas3fs s3://BUCKET/PATH LOCAL-PATH
# For multiple hosts mount
yas3fs s3://BUCKET/PATH LOCAL-PATH --topic TOPIC-ARN --new-queue

On a Mac with OS X

Install FUSE for OS X from http://osxfuse.github.com.

sudo pip install yas3fs # assume root installation
mkdir LOCAL-PATH
# For single host mount
yas3fs s3://BUCKET/PATH LOCAL-PATH
# For multiple hosts mount
yas3fs s3://BUCKET/PATH LOCAL-PATH --topic TOPIC-ARN --new-queue

On CentOS 6

sudo yum -y install fuse fuse-libs centos-release-scl
sudo yum -y install python27
# upgrade setuptools
scl enable python27 -- pip install setuptools --upgrade
# grab the latest sources
git clone https://github.com/danilop/yas3fs.git
cd yas3fs
scl enable python27 -- python setup.py install
scl enable python27 -- yas3fs -h # See the usage
mkdir LOCAL-PATH
# For single host mount
scl enable python27 -- yas3fs s3://BUCKET/PATH LOCAL-PATH
# For multiple hosts mount
scl enable python27 -- yas3fs s3://BUCKET/PATH LOCAL-PATH --topic TOPIC-ARN --new-queue

/etc/fstab support

# Put contrib/mount.yas3fs to /usr/local/sbin and make the symlink
chmod +x /usr/local/sbin/mount.yas3fs
cd /sbin; sudo ln -s /usr/local/sbin/mount.yas3fs.centos6 # replace centos6 to amzn1 for Amazon Linux installation
# Add the contents of contrib/fstab.snippet to /etc/fstab and modify accordingly
# Try to mount
mount /mnt/mybucket

Workaround to unmount yas3fs correctly during host shutdown or reboot

sudo cp contrib/unmount-yas3fs.init.d /etc/init.d/unmount-yas3fs
sudo chmod +x /etc/init.d/unmount-yas3fs
sudo chkconfig --add unmount-yas3fs
sudo chkconfig unmount-yas3fs on
sudo /etc/init.d/unmount-yas3fs start

To listen to SNS HTTP notifications (I usually suggest to use SQS instead) with a Mac
you need to install the Python M2Crypto module,
download the most suitable “egg” from
http://chandlerproject.org/Projects/MeTooCrypto#Downloads.

sudo easy_install M2Crypto-*.egg

If something does not work as expected you can use the -df options to run in foreground and in debug mode.

Unmount

To unmount the file system on Linux:

fusermount -u LOCAL-PATH
or
umount LOCAL-PATH

The latter works if /etc/fstab support steps (see above) were completed

To unmount the file system on a Mac you can use umount.

rsync usage

rsync’s option –inplace has to be used to avoid S3 busy events

Full Usage

yas3fs -h

usage: yas3fs [-h] [--region REGION] [--topic ARN] [--new-queue]
              [--new-queue-with-hostname] [--queue NAME] 
              [--queue-wait N] [--queue-polling N] [--nonempty]
              [--hostname HOSTNAME] [--use-ec2-hostname] [--port N]
              [--cache-entries N] [--cache-mem-size N] [--cache-disk-size N]
              [--cache-path PATH] [--recheck-s3] [--cache-on-disk N] [--cache-check N]
              [--s3-num N] [--download-num N] [--prefetch-num N] [--st-blksize N]
              [--buffer-size N] [--buffer-prefetch N] [--no-metadata]
              [--prefetch] [--mp-size N] [--mp-num N] [--mp-retries N]
              [--s3-retries N] [--s3-retries-sleep N] 
              [--s3-use-sigv4] [--s3-endpoint URI]
              [--aws-managed-encryption] 
              [--no-allow-other]
              [--download-retries-num N] [--download-retries-sleep N]
              [--read-retries-num N] [--read-retries-sleep N]
              [--id ID] [--mkdir] [--uid N] [--gid N] [--umask MASK]
              [--read-only] [--expiration N] [--requester-pays]
              [--with-plugin-file FILE] [--with-plugin-class CLASS]
              [-l FILE] 
              [--log-mb-size N] [--log-backup-count N] [--log-backup-gzip]
              [-f] [-d] [-V]
              S3Path LocalPath

YAS3FS (Yet Another S3-backed File System) is a Filesystem in Userspace (FUSE)
interface to Amazon S3. It allows to mount an S3 bucket (or a part of it, if
you specify a path) as a local folder. It works on Linux and Mac OS X. For
maximum speed all data read from S3 is cached locally on the node, in memory
or on disk, depending of the file size. Parallel multi-part downloads are used
if there are reads in the middle of the file (e.g. for streaming). Parallel
multi-part uploads are used for files larger than a specified size. With
buffering enabled (the default) files can be accessed during the download from
S3 (e.g. for streaming). It can be used on more than one node to create a
"shared" file system (i.e. a yas3fs "cluster"). SNS notifications are used to
update other nodes in the cluster that something has changed on S3 and they
need to invalidate their cache. Notifications can be delivered to HTTP or SQS
endpoints. If the cache grows to its maximum size, the less recently accessed
files are removed. Signed URLs are provided through Extended file attributes
(xattr). AWS credentials can be passed using AWS_ACCESS_KEY_ID and
AWS_SECRET_ACCESS_KEY environment variables. In an EC2 instance a IAM role can
be used to give access to S3/SNS/SQS resources. AWS_DEFAULT_REGION environment
variable can be used to set the default AWS region.

positional arguments:
  S3Path               the S3 path to mount in s3://BUCKET/PATH format, PATH
                       can be empty, can contain subfolders and is created on
                       first mount if not found in the BUCKET
  LocalPath            the local mount point

optional arguments:
  -h, --help           show this help message and exit
  --region REGION      AWS region to use for SNS and SQS (default is eu-
                       west-1)
  --topic ARN          SNS topic ARN
  --new-queue          create a new SQS queue that is deleted on unmount to
                       listen to SNS notifications, overrides --queue, queue
                       name is BUCKET-PATH-ID with alphanumeric characters
                       only
  --new-queue-with-hostname
                       create a new SQS queue with hostname in queuename,
                       overrides --queue, queue name is BUCKET-PATH-ID with
                       alphanumeric characters only
  --queue NAME         SQS queue name to listen to SNS notifications, a new
                       queue is created if it doesn't exist
  --queue-wait N       SQS queue wait time in seconds (using long polling, 0
                       to disable, default is 20 seconds)
  --queue-polling N    SQS queue polling interval in seconds (default is 0
                       seconds)
  --hostname HOSTNAME  public hostname to listen to SNS HTTP notifications
  --use-ec2-hostname   get public hostname to listen to SNS HTTP notifications
                       from EC2 instance metadata (overrides --hostname)
  --port N             TCP port to listen to SNS HTTP notifications
  --cache-entries N    max number of entries to cache (default is 100000
                       entries)
  --cache-mem-size N   max size of the memory cache in MB (default is 128 MB)
  --cache-disk-size N  max size of the disk cache in MB (default is 1024 MB)
  --cache-path PATH    local path to use for disk cache (default is
                       /tmp/yas3fs-BUCKET-PATH-random)
  --recheck-s3         Cache ENOENT results in forced recheck of S3 for new file/directory
  --cache-on-disk N    use disk (instead of memory) cache for files greater
                       than the given size in bytes (default is 0 bytes)
  --cache-check N      interval between cache size checks in seconds (default
                       is 5 seconds)
  --s3-endpoint        the S3 endpoint URI, only required if using --s3-use-sigv4
  --s3-num N           number of parallel S3 calls (0 to disable writeback,
                       default is 32)
  --s3-retries N       number of retries for s3 write operations (default 3)
  --s3-retries-sleep N  number of seconds between retries for s3 write operations (default 1)
  --s3-use-sigv4       use signature version 4 signing process, required to connect
                       to some newer AWS regions. --s3-endpoint must also be set
  --download-num N     number of parallel downloads (default is 4)
  --download-retries-num N max number of retries when downloading (default is 60)
  --download-retries-sleep N how long to sleep in seconds between download retries (default is 1)
  --read-retries-num N max number of retries when read() is invoked (default is 10)
  --read-retries-sleep N how long to sleep in seconds between read() retries (default is 1)
  --prefetch-num N     number of parallel prefetching downloads (default is 2)
  --st-blksize N       st_blksize to return to getattr() callers in bytes, optional
  --nonempty           allows mounts over a non-empty file or directory
  --buffer-size N      download buffer size in KB (0 to disable buffering,
                       default is 10240 KB)
  --buffer-prefetch N  number of buffers to prefetch (default is 0)
  --no-metadata        don't write user metadata on S3 to persist file system
                       attr/xattr
  --prefetch           download file/directory content as soon as it is
                       discovered (doesn't download file content if download
                       buffers are used)
  --mp-size N          size of parts to use for multipart upload in MB
                       (default value is 100 MB, the minimum allowed by S3 is
                       5 MB)
  --mp-num N           max number of parallel multipart uploads per file (0 to
                       disable multipart upload, default is 4)
  --mp-retries N       max number of retries in uploading a part (default is
                       3)
  --aws-managed-encryption  Enable AWS managed encryption (sets header x-amz-server-side-encryption = AES256)
  --no-allow-other     do not allow other users to access this bucket
  --id ID              a unique ID identifying this node in a cluster (default
                       is a UUID)
  --mkdir              create mountpoint if not found (and create intermediate
                       directories as required)
  --uid N              default UID
  --gid N              default GID
  --umask MASK         default umask
  --read-only           mount read only
  --expiration N       default expiration for signed URL via xattrs (in
                       seconds, default is 30 days)
  --requester-pays     requester pays for S3 interactions, the bucket must
                       have Requester Pays enabled
  --with-plugin-file FILE
                       YAS3FSPlugin file
  --with-plugin-class CLASS
                       YAS3FSPlugin class, if this is not set it will 
                       take the first child of YAS3FSPlugin from exception 
                       handler file
  -l FILE, --log FILE  filename for logs
  --log-mb-size N       max size of log file
  --log-backup-count N  number of backups log files
  --log-backup-gzip     flag to gzip backup files

  -f, --foreground     run in foreground
  -d, --debug          show debug info
  -V, --version        show program's version number and exit

Signed URLs

You can dynamically generate signed URLs for any file on yas3fs using Extended File attributes.

The default expiration is used (30 days or the value, in seconds, of the ‘–expiration’ option).

You can specify per file expiration with the ‘yas3fs.expiration’ attribute (in seconds).

On a Mac you can use the ‘xattr’ command to list 'yas3fs.* attributes:

$ xattr -l file
yas3fs.bucket: S3 bucket
yas3fs.key: S3 key
yas3fs.URL: http://bucket.s3.amazonaws.com/key
yas3fs.signedURL: https://bucket.s3.amazonaws.com/... (for default expiration)
yas3fs.expiration: 2592000 (default)

$ xattr -w yas3fs.expiration 3600 file # Sets signed URL expiration for the file to 1h
$ xattr -l file
yas3fs.bucket: S3 bucket
yas3fs.key: S3 key
yas3fs.URL: http://bucket.s3.amazonaws.com/key
yas3fs.signedURL: https://bucket.s3.amazonaws.com/... (for 1h expiration)
yas3fs.expiration: 3600

$ xattr -d yas3fs.expiration file # File specific expiration removed, the default is used again

Similarly on Linux you can use the ‘getfattr’ and ‘setfattr’ commands:

$ getfattr -d -m yas3fs file
# file: file
user.yas3fs.URL="http://bucket.s3.amazonaws.com/key"
user.yas3fs.bucket="S3 bucket"
user.yas3fs.expiration="2592000 (default)"
user.yas3fs.key="S3 key"
user.yas3fs.signedURL="https://bucket.s3.amazonaws.com/..." (for default expiration)

$ setfattr -n user.yas3fs.expiration -v 3600
$ getfattr -d -m yas3fs file
# file: file
user.yas3fs.URL="http://bucket.s3.amazonaws.com/key"
user.yas3fs.bucket="S3 bucket"
user.yas3fs.expiration="3600"
user.yas3fs.key="S3 key"
user.yas3fs.signedURL="https://bucket.s3.amazonaws.com/..." (for 1h expiration)

$ setfattr -x user.yas3fs.expiration latest.zip # File specific expiration removed, the default is used again

Notification Syntax & Use

You can use the SNS topic for other purposes than keeping the cache of the nodes in sync.
These are some sample use cases:

  • You can listen to the SNS topic to be updated on changes on S3 (if done through yas3fs).
  • You can publish on the SNS topic to manage the overall “cluster” of yas3fs nodes.

The SNS notification syntax is based on JSON (JavaScript Object Notation):

[ "node_id", "action", ... ]

The following action(s) are currently implemented:

  • mkdir (new directory): [ "node_id", "mkdir", "path" ]
  • rmdir (remove directory): [ "node_id", "rmdir", "path" ]
  • mknod (new empty file): [ "node_id", "mknod", "path" ]
  • unlink (remove file): [ "node_id", "unlink", "path" ]
  • symlink (new symbolic link): [ "node_id", "symlink", "path" ]
  • rename (rename file or directory): [ "node_id", "rename", "old_path", "new_path" ]
  • upload (new or updated file): [ "node_id", "upload", "path", "new_md5" ] (path and new_md5 are optional)
  • md (updated metadata, e.g. attr/xattr): [ "node_id", "md", "path", "metadata_name" ]
  • reset (reset cache): [ "node_id", "reset", "path" ] (path is optional)
  • cache (change cache config): [ "node_id", "cache" , "entries" or "mem" or "disk", new_value ]
  • buffer (change buffer config): [ "node_id", "buffer", "size" or "prefetch", new_value ]
  • prefetch (change prefetch config): [ "node_id", "prefetch", "on" or "off" ]
  • url (change S3 url): [ "node_id", "url", "s3://BUCKET/PATH" ]

Every node will listen to notifications coming from a node_id different from its own id.
As an example, if you want to reset the cache of all the nodes in a yas3fs cluster,
you can send the following notification to the SNS topic (assuming there is no node with id equal to all):

[ "all", "reset" ]

To send the notification you can use the SNS web console or any command line tool that supports SNS, such as AWS CLI.

In the same way, if you uploaded a new file (or updated an old one) directly on S3
you can invalidate the caches of all the nodes in the yas3fs cluster for that path sending this SNS notification:

[ "all", "upload", "path" ]

The path is the relative path of the file system (/ corresponding to the mount point)
and doesn’t include any S3 path (i.e. prefix) as given in the --url option.

To change the size of the memory cache on all nodes, e.g. to bring it from 1GB (the current default) to 10GB,
you can publish (the size is in MB as in the corresponding command line option):

[ "all", "cache", "mem", 10240 ]

To change the size of the disk cache on all nodes, e.g. to bring it from 10GB (the current default) to 1TB,
you can publish (the size is in MB as in the corresponding command line option):

[ "all", "cache", "disk", 1048576 ]

To change the buffer size used to download the content (and make it available for reads) from the default of 10MB (optimized for a full download speed) to 256KB (optimized for a streaming service) you can use (the size is in KB, as in the corresponding command line option):

[ "all", "buffer", "size", 256 ]

To change buffer prefetch from the default of 0 to 1 (optimized for sequential access) you can publish:

[ "all", "buffer", "prefetch", 1 ]

Similarly, to activate download prefetch of all files on all nodes you can use:

[ "all", "prefetch", "on" ]

To change the multipart upload size to 100MB:

[ "all", "multipart", "size", 102400 ]

To change the maximum number of parallel threads to use for multipart uploads to 16:

[ "all", "multipart", "num", 16 ]

To change the maximum number of retries for multipart uploads to 10:

[ "all", "multipart", "retries", 10 ]

You can even change dinamically the mounted S3 URL (i.e. the bucket and/or the path prefix):

[ "all", "url", "s3://BUCKET/PATH" ]

To check the status of all the yas3fs instances listening to a topic you can use:

[ "all", "ping" ]

To the previous message all yas3fs instances will answer publishing a message on the topic with this content:

[ "id", "status", hostname, number of entries in cache, cache memory size,
  cache disk size, download queue length, prefetch queue length, S3 queue length ]

Loading files into S3

Have to load a massive amount of files into an S3 bucket that you intend to front though yas3fs? Check out s3-bucket-loader for massively parallel imports to S3.

Testing

Use this tool to test a YAS3FS install: yas3fs-test

It will run through a slew of common commands on one or more nodes, adjust the settings.py file to what you imagine your production environment to look like.

It is INVALUABLE for making changes to the yas3fs code base.

More tests always being added.

You can use this tool to test a YAS3FS cluster: yas3fs-cluster-tester

It is a test harness suite to induce file I/O and validate YAS3FS cluster activity across N peer-nodes.

This may be useful to anyone who wants to validate/test YAS3FS to see how it behaves under load and with N peers all managing files in the same S3 bucket. This has been used to test YAS3FS against a several node “cluster” with each node generating hundreds of files.

IAM Policy Permissions

S3
{
  "Effect": "Allow",
  "Action": [
      "s3:GetBucketLocation",
      "s3:DeleteObject",
      "s3:GetObject",
      "s3:GetObjectVersion",
      "s3:ListBucket",
      "s3:PutObject"
  ],
  "Resource": [
      "arn:aws:s3:::bucketname",
      "arn:aws:s3:::bucketname/*"
  ]
}
SNS
{
  "Effect": "Allow",
  "Action": [
      "sns:ConfirmSubscription",
      "sns:GetTopicAttributes",
      "sns:Publish",
      "sns:Subscribe",
      "sns:Unsubscribe"
  ],
  "Resource": [
      "arn:aws:sns:region:acct:topicname"
  ]
}
SQS
{
  "Effect": "Allow",
  "Action": [
  	  "sqs:CreateQueue",
      "sqs:DeleteMessage",
      "sqs:GetQueueAttributes",
      "sqs:GetQueueUrl",
      "sqs:ReceiveMessage",
      "sqs:SetQueueAttributes",
      "sqs:SendMessage"
  ],
  "Resource": [
      "arn:aws:sqs:region:acct:queuename"
  ]
}
IAM
{
  "Effect": "Allow",
  "Action": "iam:GetUser",
  "Resource": [
      "*"
  ]
}

Happy File Sharing!