R

Top R Frameworks & Libraries for other tools

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share th...

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Tools for summarizing/visualizing regressions and other helpful stuff

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Prefix function with their namespace & other development tools

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Utilities for working with formulas, expressions, calls and other R objects

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:no_entry: ARCHIVED :no_entry: An R package that provides tools to review other R packages

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16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/...

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:alarm_clock: This R package provides the tools to perform standard and robust wavelet variance analysis for time series (signal processing). Among others, aside f...

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OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool developmen...

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Hierarchical Model of Species Communities (HMSC) is an R package, which provides extensive set of analytical tools devised for numerical analysis of data on ecolog...

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haploR: utilities for mining Haploreg and other similar web-based tools

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The juicr R package is a GUI interface to automated, semi-automated, and manual tools for extracting data from scientific images -- like scatter or bar plots that...

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An R package of support tools that didn’t fit other categories, including tools for maintaining R libraries....

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Set of R tools for analyzing real estate data from Zillow and other sources.

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An R-based command line tool designed to prepare climate inputs for WEPP, which has been extended to perform other general functions such as quality checking, gap...

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The coMET package is a web-based plotting tool and R-based package to visualize different genome-wide association scans such as EWAS (epigenome-wide association sc...

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Climate data tools (CDT) is a tool for data quality control, homogenization and merging station data with satellite and others proxies....

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An interactive tool to visualize the effects of reducing missing data or removing samples in ddRAD and other similar datasets...

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Working Demo on 16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Visit repo website for HTML output...

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A repository of analytics tools for GeoBeer events, suitable also for other organizers. If you want to read about the insights of these analyses, head over to http...

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Tool to identify concept in the OMOP Genomic vocabulary from VCF and other files as well as HGVS notations...

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The goal of babelmixr2 is to interface nlmixr2 with other pharmacometric tools

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